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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|69943650, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGLTITTKK SQLSVLVASA LLSTSIALSG CTPDAPSALS ENSALSENSV LSETWAPGAP  60
   61 GAEPTWAFAG KTGIGTAYEP YVDGKYQAQA ANPVSKVWFS VAQGILTETM YGLIHNAQLK 120
  121 ELQFVMTGKG FIDTEKDHTT SSIEYLHQDD QGRPQSLAYK ITNKDIEGKY QIEKHIFTNP 180
  181 DNDSLMMKVI FTAFEAGITP HLYVNPHIDN SGANDSATIE DGALIAQTLA ADSTVMTVKT 240
  241 STEFVSASAG FVGVSDGLSD LMDNGKLDWR YTNTGKQAGN VALTAQYPEL TMNTPLEFDL 300
  301 VIGFAADKAS SLATANASLA QGSDAVLSAY LGNDSHLGWK DYLASLSPLD AMSRSTTDNG 360
  361 KLLYASALVL KAQEDKTHAG ALIASLSNPW GDSVSAKVGS TGYKAVWPRD FYQCAMAFLA 420
  421 MGDTQTPKVA FEYLKKVQVT KDTKGYSGTP GWFLQKTHVD GEIEWVGVQL DQTAMPIMLG 480
  481 WKLWQAGVFT DAEISHWYHS MLKPAADFLV NGGKVKLDWN DTHITTPSTQ QERWEEQLGF 540
  541 SPSTTAAVIA GLVAASDIGA LAKDEQAQQY LEFAKKLEAK LETQMVTQNG LLGQESEIDA 600
  601 NTEKNHSEID KPAPYYVRIS PQGDPNTAIK LLDNNGKPGL DQRLILDAGF LELVRYGVRD 660
  661 AKDPIIANSL ALVDLELEDN LRLKYLFSAK DGSTVPGYRR YGNDGYGEDT QTGLSYAENG 720
  721 NTADQRGRVW PFFTGERGHY ELALALSGTL VDGKLDAQRK QALINTYVQG METFANEGLM 780
  781 LPEQVWDGVG NSTRYGYRLG QGTNSATPLA WTHAEYVKLV RSMTDEALWD HYPKVSATFS 840
  841 K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle