YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91791692, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTGKKILLG IGGGIAAYKA ADLIRRLKER GCDVRVVMSQ GAQAFITPLT IQALSGHPVS  60
   61 SDLLDPAAEA GMGHIELARW ADAMLIAPAT ANLIARINAG MADELITTTC LATSAPIILC 120
  121 PAMNQQMYQN LATQDNLANL QRRGFPLWGP ASGSQACGEV GPGRMLEPLD IAHMLELFFA 180
  181 PKLLTGHKLL LTAGPTREAI DPVRYISNHS SGKMGFALAK AAAEMGAEVT LVAGPVNLAT 240
  241 PHGVKRIDVE SAEQMLEAVM AQVDEHNIFI GCAAVADYRI ATVATDKIKK SAEQMQLALV 300
  301 RNPDILATVA QHKPKLFTVG FAAETQDVEK YARGKLEKKQ LDMIAANDVS IQGLGFNADD 360
  361 NALVVFDKES CQHLPATNKL TLARQLLTLI EQKLTAQ

Type	Start	End	Confidence
Signal Peptide	1	17	0.51
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	397	0.97