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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|91715857, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHPDLLSRQ NHNVSPSTLG LTLACILGSF PCQVLAGNVL GVPKVTGIEV IEVSGIQHRR  60
   61 PMAIVTPGEA LITMEQLEEM QASSFAEVID DMAGAHIDGG TRSGGERINI WGFGETEDLN 120
  121 VYVDNAPVGF EQYRYGSFFI DPDLLKQVEV IKGAHDVRSG NGGFGGAIYA VTKSASDFLK 180
  181 HDQSFGSRVK ASYASNNETK GYTATSYATF SPELSALLHI TGKEADDTEL ATGEAYAYSG 240
  241 FEQQNYLGKL DFEQGDHQLA LSFTRYLDEG RKPWANRRGA MPTISDYNIK KYGSYEQALY 300
  301 ATTSDNTYRE NTWSANYRYS PSNPLIDTQV AISHSSNDRH WIRPDIAWEK MFVSVGSFGH 360
  361 ESWLEYKRDF VDINNLSRFG NHELITGLQY RSLDRNSLVF NKSYQKKAEK NFGLYTPYYQ 420
  421 PSGRQDTYAA YIQDRISLTD ELTIKPSLRY DYIYSVGREN LASDYNDLAA GHDYSATDHS 480
  481 GWSPRFGLEY RLSTNHQLSF DYAYSLMAPV VDEIYAVQYA KASITATSPE VELERLHAYK 540
  541 LGLTSSFSDL FAAQDRLATQ VTLFANHGEN DIAQRRGENS DKSLPLQSNY TNLDGYKMHG 600
  601 VDIEAQYRVA RFFSDLAASW QAGTHNGSLR DSQGDDEYLA NIAPLDIKLR LGYYLTDELS 660
  661 LAWQGAWYDA QDKVPSEDLF NSELPSDNYF LQHATLAYEP QGSLSGLTLR LMLKNITNVQ 720
  721 VTPFLSDGIP AAGRDVRLSA AYSF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle