YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91717044, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.74
Topology Confidence:	0.27
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQAYIEFFQA NPILSLAWVG LFSALVVTVI KASTSKVNNI SHQELTQLVN KQNAKVVDVR  60
   61 GKEDFRKGHI IDALNVTLAE IKNNQLTALE KYKASPIILV CKAGMTSSQA AQLLVKQGFE 120
  121 NIHNLKGGID DWQTANLPLV KSKK

Type	Start	End	Confidence
Cytoplasmic	1	9	0.27
Transmembrane Helix	10	33	0.62
Non-Cytoplasmic	34	144	0.54