YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91714778, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALIITKKAA DLPKPKKPVI GLALGSGAAK GWAHIGVLNG LAKLGIFPDK VAGCSVGALV  60
   61 GAAYANDNLD EIEKWVRGFS SWDVLGLMDI RWRKGGIING EKVFEVLSSR VGALKIEQLK 120
  121 RAFAAVATDL YSGQEIWFRE GDLRHAVRAS CSMPGFLPPV QQDDRWLVDG AVVNPVPVSL 180
  181 CRAMGVDLVI AVDLNGHRRG QMMMLPEQVV SHQAEKSQTV TEKPQLESGF MDLWGKSKEY 240
  241 LSGLTEKFSL GVNSHPGMLA VMSQSMDILE QRHKRARLMG DPPDICIVPQ VFDIGTMEFH 300
  301 RAAEAIAAGE QAVENISHLL KASIGDFDSA PQR

Type	Start	End	Confidence
Signal Peptide	1	33	0.83
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	333	0.99