YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115520238, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKARIVVLA IAVSAGGAAA YLASGADSPK PPPQVAQVPT AQLKTVDVLV AKTNLALGQL  60
   61 VGPSDVQWQN WPADSANSNF IRRDQHPNFD TTVAGSIARS PFVAGEPIRE VKLVRPNGSG 120
  121 FMAAILPSGM RAISTEISPE TGAGGFILPN DRVDVILSKR ERNSDSESSK ENVTSVTILT 180
  181 NVRVLAIDQL PKEREGQNVA VGKTATLELL PEQAEQLARA RQSGTLSLAL RSMVDSNVVA 240
  241 TVTDDKQVTI YKGSEKEQYS CTPLCERR

Type	Start	End	Confidence
Signal Peptide	1	20	0.98
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	268	0.99