YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77740696, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLDLLRLFL FPALMAFAAA SDLLTMTISN RVSLLLVLGF FGMALLSGMG WQAVLMHASA  60
   61 GGTVLLVAFG CFAMGWIGGG DAKVASAAAL WFGFDQLLQY LVYASLFGGA LTLMLLQFRQ 120
  121 WPLPGVLRGQ PWLLRLHSNA TGIPYGIALA TGALMIYPHT AWIRAVDLAH FAIR

Type	Start	End	Confidence
Cytoplasmic	1	7	0.51
Transmembrane Helix	8	26	0.89
Non-Cytoplasmic	27	31	0.44
Transmembrane Helix	32	55	0.84
Cytoplasmic	56	59	0.45
Transmembrane Helix	60	80	0.90
Non-Cytoplasmic	81	96	0.51
Transmembrane Helix	97	118	0.89
Cytoplasmic	119	138	0.48
Transmembrane Helix	139	161	0.86
Non-Cytoplasmic	162	174	0.53