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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77701293, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSISPDDDDM EVKQRYNDRE SDFPTMVAAI VLVLMMAVGA FFNILTLRQR AEQDTKKNLA  60
   61 KLALVISEET SRSFQSVDLT LRAILERIAE KNYATPAQLR NAMADQTVYD SLSEKASGLP 120
  121 QISNIAIFDA DGVLVNNSLL WPAPLISIDD REQFRYLSEV DDTNSIIGEP VLSRIDGSWK 180
  181 LFLARRINGP DRRFLGLIEA SIKLKSLEDF YQSIDLGEGS TIALIRRDGA LLARYPRTDT 240
  241 MIGRRLTDPE PGKMERDLKE GAVVSRLALD GEHRYVAYRP VKDFPLTVST TLTQDVVLAS 300
  301 WRGDATIEAF GALGAVAGVL LLLSVLTRQI GKGRRSALLL ARQNARFARS RQMLLDAQRI 360
  361 GKLGHWMTNA AGDSAVWSPQ LFEIAGLAPR PGVSLDQFLA LIHPEDLQVF LHELELSRSG 420
  421 DTKLIHELRW VRPDGAIRWI RMEADRRRDA NGDPVGVFGI VQDITERKRA EAAAEASRHL 480
  481 LVDAIESMSQ GFVLYDKHDR FVLANSHFKE MFPELADRMK PGMRYEDVLC AVHQSDLVDA 540
  541 PKAGASFDEW LARTTAWHRA ANRPIERRYD NGRWIRLVDH RTSDGGIAGL RTDITDFKTI 600
  601 EAALEQKVAD LELARNNLES QKQELVAKSA DLELAKETAE AASRAKSDFL AIMSHEIRTP 660
  661 MSGMVGMIDL LRETPLTAEQ KGYAEIAKES VNSLLGVTND ILDFSKLEAG ELKAEAIDFD 720
  721 IEHTIGGAIS LMKAKAQAKQ LDIRTVLTPG LPKWLVGDPS RIRQILLNLI NNAIKFTEQG 780
  781 AISVKASYHS LDDDKIELRI EIVDTGIGIP MEVQQRLFNP FVQADTSISR KYGGTGLGLA 840
  841 ICKQLALMMG GEIGVRSGPE PGSTFWFTVH CGICAAATIA NKQVDPVLAG DLFLEILVAE 900
  901 DSPIIASLIS TLLGKRSYTA DVVGNGHLAV AAVQAKRYDL VLMDVQMPEM DGISATRAIR 960
  961 ALPGTERNIP IIALTANAFV GQRESYLAAG MDDCVTKPIQ PNDLFAAISR CGRKGLRVIA1020
 1021 DQAPLVPESA EPATESISR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle