YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115517201, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEIARVQGA LDSTGERARS LQTVYVYQAP VRLWHWVNAL LILGLCITGY FIGSPLPSVP  60
   61 GEASNSFQMG YIRFIHFACG QTLIVFFLLR FYWAFVGNKY SKQLFVMPIT NRTWWWGMLY 120
  121 EFKWYAFLVK DPKKYIGHNP LAHVAMFSFM LFMVFMMVSG MALYSEGHGI DSWQYKVFGF 180
  181 VFSIFPNSQD VHTLHHLGMW AIVVFVIVHI YAAVREDILS RQSMISSIVS GERLFRDDLP 240
  241 D

Type	Start	End	Confidence
Cytoplasmic	1	33	0.89
Transmembrane Helix	34	53	0.94
Non-Cytoplasmic	54	71	0.81
Transmembrane Helix	72	94	0.91
Cytoplasmic	95	141	0.87
Transmembrane Helix	142	164	0.91
Non-Cytoplasmic	165	191	0.92
Transmembrane Helix	192	214	0.90
Cytoplasmic	215	241	0.97