YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77691698, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRLRAQAAG PAQLTSAGGI GHSTNLLGVP MEFLTDVAFN DQPVPLHIAG VREMNPSLFE  60
   61 MLDQARDLAD AGEAFSCYMA ALFGIDPEQR LRNVNGRGRF RSSFLDLIKG WGFDSNGAEG 120
  121 AVLKGWVESR FGIFPTFHKE AIRRIASPAW TTYVEEKMSS RFHNNAIYVQ LDLLFEFCQW 180
  181 ALAHFAAAGS THVTLYRGVN AFDEHQIVQR FDRRHVVMRL NNLTSFSSDR SIADCFGDTI 240
  241 LTVRVPVPKI LFFNRLLPAH PLKGEGEYLV IGGAYRVTAS YF

Type	Start	End	Confidence
Signal Peptide	1	19	0.66
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	282	0.98