YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91975644, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTEIARVQG ALDSAGERAR SLQTVYVYQA PVRLWHWVNA LLIVVLCVTG YFIGTPLPSV  60
   61 PGEASASFQM GYIRFAHFAA GQTLIVFFLL RVYWAFVGNK YSKQIFWLPI TNKTWWWGML 120
  121 YELKWYLFLV RDPKKYIGHN PLAHVAMFSF MVFMVLMILS GMALYSEGHG IDSWQYKLFG 180
  181 FMFAIFPNGQ TLHTLHHLGM WAIVVFVVVH IYAAVREDIL SRQSMISSIV SGERLFRDDL 240
  241 PD

Type	Start	End	Confidence
Cytoplasmic	1	34	0.88
Transmembrane Helix	35	55	0.92
Non-Cytoplasmic	56	74	0.79
Transmembrane Helix	75	95	0.94
Cytoplasmic	96	141	0.78
Transmembrane Helix	142	165	0.89
Non-Cytoplasmic	166	192	0.80
Transmembrane Helix	193	215	0.89
Cytoplasmic	216	242	0.95