YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77637482, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTWLNFFTTI YSLTIFILSV VIILDNRNPS RTLAWILVLI FLPGAGVFLY LYIGQNHRKK  60
   61 NTFIKKRKEN YRILNHLLEE QVPITQYSGL FHQFFDDIRG KIIPLLLNNT YSPLTVNNEV 120
  121 KVLHNGEETF REMLQEIEGA THHIHMEYFI IKDSDIGRIF QKALIKKAEE GIEVRLIYDA 180
  181 VGSWKLKKDF LQPLKDAGVE AVAFLPVTIP FFGSRLNYRN HRKILIVDGQ VGFVGGLNIG 240
  241 DEYLGKSEKM GFWRDVHLKI MGESVYVLQA IFLMDWYFVK KEEIDSLAYF PKQKDCGQRL 300
  301 IQVASSGPDS YWAAIQQTYF TALTGATKRA YIMSPYLIPD DSMLMALKTA ALGGVDVRIL 360
  361 LPGRPDHRTV FWASKSHFEE LLEAGVQIYQ YQKGFVHGKM ILVDSVFTSI GTANIDIRSF 420
  421 QLNFEVNAFI YDEEVTDQLV EVFLEDLKDS KEVTLEEYHK RPLSHKAMES VTRLLSPIL

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.72
Transmembrane Helix	7	24	0.97
Cytoplasmic	25	32	0.69
Transmembrane Helix	33	54	0.95
Non-Cytoplasmic	55	479	0.86