YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|149948927, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKVLTIAGS DSSGGAGIQA DLKTMSAHGV FGMSVITAVT AQNTQGVFGI QDISPQMIAK  60
   61 QIQAIYEDIE VDAVKIGMVS QVDTIQAIAQ QLLKYQAKNI VLDPVMVSKS GFHLLNPEAK 120
  121 NSLINQLIPL VTVITPNLPE AEVITGLTIE SEKDMEEAAK AIFIMGPQYV LIKGGHLESD 180
  181 PVDLLYDGKA IQRFSTKRIA TKNTHGTGCT LSSAIASNLA LGFPITEAVK LAKEYITVAI 240
  241 ENALSIGKGV GPTHHFYSLY QRAGLE

Type	Start	End	Confidence
Signal Peptide	1	20	0.64
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	266	0.98