YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|149950477, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTHSSITVLG AGSWGTALSL ILAKKGHEVK LWMRNQEQYE EMNRQRENTK YLPGTQLHEN  60
   61 IKLYVDIEKA VKGTDVVLLT ISSQAVRGVL KNIRSIITRE QIIVNAAKGL EANTLLRISQ 120
  121 VVEEELGSHP FAVLSGPSHA EEVSKDIPTT VVVAAYERSV AECIQDLFMS SYFRVYTNPD 180
  181 VIGVELGGAL KNVIAFGAGI SDGLGYGDNA KAALMTRGIR EIARLGSAMG GKLETFAGLT 240
  241 GIGDLIVTCT SMHSRNRRAG ILTGQGKSLE ETLSEIGMVV EGIKTTKAAF ELAKQYQIEM 300
  301 PITEEIYSIL YKDIPPRVAV SNLMSRDRTH EIEDIVDAEK INW

Type	Start	End	Confidence
Signal Peptide	1	23	0.88
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	343	0.98