YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|117672747, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSDASSGGI HYQVQFKVSL TQTGNGKEFI VKKWLCAASL GLALAASASV QAADKIAIVN  60
   61 VSSIFQQLPA REAVAKQLEN EFKGRATELQ GMERDLQTKM QKLQRDGSTM KASDRTKLEN 120
  121 EVMKQRETFS TKAQAFEQDN RRRQAEERNK ILSRIQDAVK SVATKGGYDV VIDANAVAYA 180
  181 DSSKDITADV LKQVK

Type	Start	End	Confidence
Signal Peptide	1	52	0.93
N-region	1	43
H-region	44	49
C-region	50	52
Cleavage Site	52	53
Non-Cytoplasmic	53	195	0.99