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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|82752947
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEAGPGLLE QLKSCVVWSW TYLWTVWFFI MLFLVYILRV PLKINDNLST VSMFLNTLTP  60
   61 KFYVALTGTS SLISGLILIF EWWYFRKYGT SFIEQVSVSH LRPLLGGVDN NSPSNSNTNN 120
  121 GDSDSNRQSV SECKVWRNPL NLFRGAEYNR YTWVTGREPL TYYDMNLSAQ DHQTFFTCDT 180
  181 DHLRPADAIM QKAWRERNPQ ARISAAHEAL ELNECATAYI LLAEEEATTI VEAEKLFKQA 240
  241 LKAGEGCYRR SQQLQHHGAQ YEAQHRRDTN VLVYIKRRLA MCARKLGRTR EAVKMMRDLM 300
  301 KEFPLLSMFN IHENLLEALL ELQAYADVQA VLAKYDDISL PKSATICYTA ALLKARAVSD 360
  361 KFSPEAASRR GLSTAEMNAV EAIHRAVEFN PHVPKYLLEM KSLILPPEHI LKRGDSEAIA 420
  421 YAFFHLQHWK RVEGALNLLH CTWEGTFRMI PYPLEKGHLF YPYPICTETA DRELLPSFHE 480
  481 VSVYPKKELP FFILFTAGLC SFTAMLALLT HQFPELMGVF AKAFLSTLFA PLNFVMEKVE 540
  541 SILPSSLWHQ LTRI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle