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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68197381, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLPVRERTR HRPCQAPSGS IRRPAATPAH LRHRKGTGLS RRDTDTYPLA RPRPGQPEDD  60
   61 HAAERNPRRP VRDRRRAADR RADTDSGTDH DEVTDHLDSL YLDRSRLDAA YQDDAYPDPE 120
  121 GRLRRAGAYS GDETEHIERR AAASRDPREA ARDADDHTRV IARPRVPARA GRAARTGRPA 180
  181 GDRSPRGGHE LVGSGPPRPH GAEPAEARRS GSRQPVADPS RRREPGGPRT PRQPGTSRQT 240
  241 GTSRQPAGGR GAGEADDLLE ADDLLEADRP GARARGAADP HATGPLETGQ PDDGSPETGP 300
  301 LETGPLTAPV LAPLGHSPAL DGLRALAVLG VMAYHAGLSW MPGGLLGVDA FFVLSGFLIT 360
  361 GLLVAEYRTT RRIDLKSFWI RRTRRLMPAL LTMMLGVAAY ARFVAQPSEV ETLRVDALST 420
  421 LGYVANWRFA LSDQSYFDHF SAPSPLLHTW SLAVEEQFYV LWPLAVYLLM WHSGRTTARW 480
  481 RNQRHKAQTL ILTVAVLGAE ASALLGLLLV VLGADASRIY YGTDTRAQAL LAGAALAVWR 540
  541 IQRRTPLTER TKKGLSVAGC LAGVAMLTVW ATVDGESRVL YSGGFLGVAV IVMLLIASIV 600
  601 EVPRGPAARV LSLPPLPTIG RVSYGLYLWH WPVFLTVTAA RTGLSGAALL GVRAAVTAAI 660
  661 TIASFHLVEN PIRRRKIRFP MPRVTVPASI CAVVALVMVA TIADPSAGRG AADLEQLAAR 720
  721 AATAAPPTAR AEPVTGRPLR AVLAGDSLAL TLGFSEFSTA AAREGLEIHD ASQLGCGVTR 780
  781 SPRRLLMGEV NLPPPGCDQW PTRLSRKVDE LRPDLAMLLV GRWEVTDQDL EGRRTHIGDP 840
  841 AFDAYLGREL DLAITTLSAR GAKVVLLTTP MFEEGEAADG SIYPETRADR VIQFNKLLRQ 900
  901 AAARHSAVTT VIDLAAALSP GNEYRGEIDG VRVRDDDGVH ISNGGGARAG QMVLPELLKL 960
  961 ARPATARGAD GPAPAPE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle