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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68198785, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVDTAPVTDT GPVTDAPATP ALEPGPLGPA PAGAPPTPPH PTGRALPRRL TRPALAVLAG  60
   61 VLLYLAFPPV GLWPLAPVAL AVLTLTVRGR RLRASYGLGM LFSLAFLLPL LRFVSFVGAD 120
  121 GWIVLSAAEA ALLALVAPAT TLVQRLPAPW LWTGAIWVAQ EALRGRAPFG GFPWGRIAFS 180
  181 QPNSPYTALA ALGGAPLVTF AVATTAALLA TAVTHATTTT AARATGTDAA GHGAAGGAAT 240
  241 HIRPLLATLT GALALTLTGL AVPLPTTAQH GTLNVAAVQG NVPEAGGLGA LGEAFQVTDN 300
  301 HVTGTENLAA AVRAGRTPQP DLVLWPENSS DIDPLTNPTA HAALTHAATV AGAPLLVGAV 360
  361 LDGPGPRHVR NAGLIWTTDG PTGAMYVKRH PVPFAEYLPG RALLEKLISR FADEMPNDFL 420
  421 AGTATGALPV AGTVIGDVIC FEVAYDGLVR DNVNRGAELL VIQTNNASFG RKGESQQQLA 480
  481 MSRLRAIEHG RATIQVSTSG QSALITPDGT ILTQTGLYEA GVLSAQLPLR TTHTLATRLG 540
  541 IVPEAVLTTL GALAMIAGLT HPRRTTHQPT PTSTDRTGDD HQHLGETHQP AAGTDQKRRG 600
  601 VEATRVVVCV PTYNERENLP DTTRRLRQAN PAVHLLVIDD ASPDGTGKIA DELADDDDHI 660
  661 HVLHRPGKSG LGSAYIAGFT WALQHGYDII VEMDADGSHQ PEQLPRLLDA LTDADLAIGS 720
  721 RWVPGGTVHN WPRSRLVLSR GANAYVRAAL GVPLHDATAG FRAYRADVLR ARDLDQVASQ 780
  781 GYCFQVDLAW RSWQAGFRVV EVPIDFVERE RGASKMSRAI VAEGFWRVGW WALTSLRRGP 840
  841 ASTSQHTGAD AAIPAPARPT DPTADSLTTP TATGPDTVDA GRP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle