YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|158313280, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEPVARPGR SDVDAPRPVV QPGGASETVA RPVDPDVDLS DPEERAELRP SPWPVLAAIA  60
   61 AGGVLGALAR HGLVVAFPHE AADFDRATFA INTSGCLLIG VLMELVGSVW AGRRLVRPFL 120
  121 GVGVLGGYTT FSAYVVDVER AVEADAPGTA LLFLFVSLAA ALIAVTVGSG LAARLLRSRD 180
  181 RSRDHSPDRS ADRPRSAAHG AGEVRGGR

Type	Start	End	Confidence
Cytoplasmic	1	52	0.98
Transmembrane Helix	53	74	0.91
Non-Cytoplasmic	75	87	0.87
Transmembrane Helix	88	108	0.93
Cytoplasmic	109	115	0.76
Transmembrane Helix	116	136	0.90
Non-Cytoplasmic	137	149	0.87
Transmembrane Helix	150	173	0.92
Cytoplasmic	174	208	0.97