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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68203727, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTATPGGADD PSGGRGARLS RRSIAGQVLV LQVAVVVLLV VAAVAASVLQ ARRTAERQAR  60
   61 DLAVAVAETF AHAPGMVAAL SSSDPSASLQ PLAEATRTRT GVDFLVVMNP VGIRYTHPDP 120
  121 TRIGQRFLGH TEPAVRGEVL TETYSGTLGP SVRAVVPVTT SDGKIAALVA AGITVENVSQ 180
  181 TAGRQLPVLL VAGLAAVALA VGGTVLVNRR LRRQTRGLGP VEITRMYEHH DTVLHAVREG 240
  241 VLIVDDQARV LLANDEARRL LGLPSDSHGR PVAELGLDPA ALDLLGSGRP AEDTVLLAGD 300
  301 RMLAVNQKPT VRDGKPLGSV ATIRDTTELQ ALTGELDAVR GMADALRAQS HEAANQLHIV 360
  361 VTLMQLDRLD EAVEFATAGL AGSQQLADRM LTAVDEPVLA ALLLGKTAQA AERGVELVVT 420
  421 DDTRFEVFDV EAAELVTVVG NLIDNAIEAA VAGEAPRRVT VSVRTEPDGL TVRVSDTGHG 480
  481 LDPTQVAAAF ERGWTTKTST STGEAARGRG LGLALVRQVV RRHGGQIEVG RDGGAVFTVR 540
  541 IPRQHGSVDM STAMTPAR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle