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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68203151, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPRRIFRGW VPLLLLVLFV IILTTGVLSG PSEYQKADLS FVQQQIDQSA GAKPETRVVD  60
   61 ATIQDSKQII RIELGNGKKY ESSFATEQAL VLANELKQQN IKYNVSVDRG NVLVSLLLNL 120
  121 LPVLLIVFLL LFFMNQMQGG GNRVMNFGKS KAKLVSKDTP KTTFADVAGA DEAIEELQEI 180
  181 KEFLENPGKF QAIGAKIPKG VLLYGPPGTG KTLLARAVAG EAGVPFYSIS GSDFVEMFVG 240
  241 VGASRVRDLF EQAKANAPAI IFVDEIDAVG RHRGAGLGGG HDEREQTLNQ LLVEMDGFDV 300
  301 KGGVILIAAT NRPDILDPAL LRPGRFDRQI VVDRPDLLGR EAILKVHAKG KPISSDVDML 360
  361 IIARRTPGFT GADLANVLNE AALLAARSDV RFISSALLEE SIDRVMAGPE RKTRAMSDRE 420
  421 KKRIAYHEGG HALVAHALPN ADPVHKITIL PRGRALGYTM QLPLEDKYLS TRSEMLDRLA 480
  481 VLLGGRTAEE LVFHEPTTGA SDDIEKATQI ARAMITQYGM SDKLGAIKFG SESGEVFLGR 540
  541 DMGHQRDYSE EVASEIDDEV RRLIEAAHDE AWEILVTYRD VLDNLVLRLM DTETLSKDDV 600
  601 LEVFATVQKR PSRGSYTGVG RRIPSDRPPV QTPAELGLVP SKVSDLVKGN SGPAGHATNG 660
  661 GGTNGGGSAN GGGVSGGNGT AGHPRPAGQA DPGTAGGPAG LGHGDPAQSG PGHSASSPAH 720
  721 GTPPPGSPPP EGPRIANPWA PPTWDNDDDR RRR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle