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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109639746, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKDSLTHRF MLFTTIVVVF IMLINFIWDY RNQRAQATLE MHEKAQVITK QLIATREVIA  60
   61 KNQNRINYDS KGNFEFKHLN PAAVGMQIGD IFGQLTHYSI KQTRLDYRSA GNAPDDYEAQ 120
  121 GLLRFSNEPH LAEIWGEDVV AGERVFRYMV PLHMQEECLS CHGEPIGDLD ITGHCKEGYK 180
  181 VEDLGGAISL IMPMDIFLHG IKLNVYRHLS FSLLLIGVIV ISMYLLVTRL VTRSLGELKG 240
  241 ATAQVGQGDF DIDLNRIKAQ GEIKELAQHI QEMADQLKDL YQNLEAKVEK RTHQLKLVNE 300
  301 DLRIKQDELE AANIKLNEIN TYKSEFLAIM SHELRTPLTS VMAFTDLLLQ DLPKELKQER 360
  361 QNLKYIKANS QNLLKLINNI LDLAKIEAGR LELKLEYVDM ADVMGAIDSV IAPLAKKKGI 420
  421 TWEISLDPEV SLLRADPEKL RRVIENLVGN AIKFTPAEGR VEIEVKNGPR DNWLMIRVID 480
  481 TGIGIPPEEQ EEIFERFTQI DSSNSRKYGG TGLGLALAKE LVSLHKGELW VESELNKGST 540
  541 FVVLLPKDPD KVDPGGNKEI 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle