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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|91708870, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSDQGSHFS IAPGGWSFYS PLIVAVLIGI SLLGIACYIH ELERQARVKE ERHYVAMLAA  60
   61 GVRARIEGEL NSSIHLGLGL STYVAANPDI NADSFNRVVA SLVHYSRHLK AITMAPDNVV 120
  121 RYVYPLAGNE QLLGVRNPPW EAGREVSLEE SRHPELIGPV NLVQGGRGMV HRLPVFVPVK 180
  181 DGGESYWGTA SIVLDIDSLL KAAGLQVRGP VLSYALRRLN DHGQVEMISG DSNLFSHHPV 240
  241 MLEINLGAHG DWQLAGMPTS GWGRLVQQND WVFWVGVSLA LALATLAYVW LRTIQQLRRR 300
  301 DARMRLATSV FASSSEGILI ANPNDEVIGI NPAVTALTGY SVQELLGRPV SFLAPEQTVA 360
  361 ESRRQASFSI SEKGVWQGEA LIKHKQGYTF PVALTITTVT GEDGRVECYI NTFSDISERK 420
  421 ANEARIHDLA HTDTLTGLPN RMSLYSGLEE RLANVQPIGV MILDLDNFKI INDTLGHHVG 480
  481 DQLLVEVARR LVCCVGEQGM VARLGGDEFV IVLDCPQATQ IVGRVAKEVL QRLAQPYLIE 540
  541 GYELHSSSSI GIGVSPHDGS DPYSLLKNID TAMYAAKSSG KNNFKFFTEK MREQINERMQ 600
  601 MENHLRQAIL RNEFELHYQP QVDLGTGRII GMEALVRWNH PEWGMVHPEK FIRVAEECNL 660
  661 VIPLGEWVLC EACRQISQWS RQGLEAVCIS VNISARQLKS RYLFTLIDNL MMTHQIKPGM 720
  721 LELEITESAV MDDPEQTIPR MKELKNKGVA LAIDDFGTGY SSLSYLKLLP LTRLKIDRSF 780
  781 VKDIETDPND AAICAATIAL ARTLGLGLVA EGVETEAQLE YLRAQGCDSA QGYYFSKPLP 840
  841 ANNIMAFVSR HQQEVMSS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle