YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91709345, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMFALFMLAV LVITGAIWLL DSLFWRKKRA ADAADPVIVE YSKSFFPVIL AVFLIRSFIV  60
   61 EPFKIPSGSM MPTLLAGDFI LVNKFSYGLR VPILNKTFFE IGHPQRGDVF VFHYPPDPSI 120
  121 DYIKRVVGVP GDRIAYRNKR LYVNGQAVQT EYVDDYKYVG SGLNMIVTKR YQEQLGDTKH 180
  181 DILIEENGMA FDGEVEVPPG HYFAMGDNRD NSKDSRVWGF VPEDNLVGKA FLIWWNFDDF 240
  241 GRIGTKIK

Type	Start	End	Confidence
Non-Cytoplasmic	1	4	0.73
Transmembrane Helix	5	25	0.78
Cytoplasmic	26	40	0.73
Transmembrane Helix	41	60	0.68
Non-Cytoplasmic	61	248	0.61