YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91772544, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGKIKSLLM VLLIAISLVG AGCVQQEDGT DTESKEVTVG YVLWDGEIAS TNVIEQVLEK  60
   61 KGYDVEIIAV DAGALYLGVA QGDFDFTTSA WLPVTQENYW NQYGDQLVSV RNNLENCPLG 120
  121 LVVPAYVEID SIAELNDNKE MFNGEIIGID PGAGIMQNTE NAIEAYGLDY KLISSSTAGM 180
  181 TAQLRKAIDD EEPVVVTLWS PHWSFGRWDL KYLDDPEGVF GQADNVETLA RTGLEEDMPE 240
  241 VYDVLTRFHW THEDIQSVMS DMESGMAPED AAAKWIENNS EKVNEWLGEE

Type	Start	End	Confidence
Signal Peptide	1	23	0.98
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	290	0.99