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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68210403, gi|...
Protein type: Transmembrane
Type Confidence: 0.47
Topology Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIVSGILVK YSLNCRRIIN FCLLIILVTG FSIGCIDTDK TPDKELALED IKNENESIRQ  60
   61 EAIGNLTKIG DEDSTDILTG ILMDKNESNS IRISAADALA EIGKGGSISP LISVLQENNS 120
  121 ALVIEVSENL VQFGDPATEM LIYTFLDNGK PEFRANLMYV LCMIADEDIE YFIEKLNSED 180
  181 ATTRINMAFI LAEMADERTV DALIVALEDE NRYVRRHAAR GLGNIGNKNA IPSLIQVMSN 240
  241 TSEPREVRSN AAIALGQIGD DDAVEPLIQM LKDEDWSVPS SAAIALGELG NSEAIPALTA 300
  301 ALRRDEEFVV KESAIALEKL DGSGIDKLID LLDDNDKSVQ KNAAYALRGI GGEKAIVPLI 360
  361 DLLEDSYEHE DARAAAASSL GTIGNKDAVL PLIQILEDKN EPETLRIRTT RALRRIGDER 420
  421 ATKPLIESLK DENPDIREAA ANALGEMGDE SALDALILSL EDENWRVRYS VVDALQKYDN 480
  481 KTVVLPISNM LDDEYWSVRK TAAQSLGTIG NQQAIPPLVE AISVEKEKDV KTTMVRSLED 540
  541 IDNGSSTDLF IRLLQDKTEF LSVREAAAIS LAKPGNEQAV DPLIQVMLDE TQAYNLRIEA 600
  601 AIALGRIGDY DAFDALSRIS KDPNEHFALR TAAEEAIANI ENIL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle