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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68186686, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKSAFSLLL ISFIILASSF PAQCMGYDAR SFNEEGVALM LNGTYDKAIE KYDLALVSDP  60
   61 NYRIALENKA AAQYLYGDYD EAIATYDHIL KLQPGSPLIF TKKGMVLAKK GDYENAIKTY 120
  121 DKALMSISKY ILGNTLNDTS ELNGSTSTAY IIEELGVDES MILYHKAKSL EGLGRNEEAI 180
  181 QLYEKFLEIQ LEHSMTLYEK GLDHARDGKS ERAIELYDEA LQIDPDNRTI WYSKGQAFDS 240
  241 LGLYEEAIES YNKAIEFDST DVKVWWNKAL DYDKLDKKED AIISYREVLV LDLYNAEAWF 300
  301 NLGVALEGTG NYFEAINSFE QVLLLDPDNI DAWHKKGLVL NKIGRFDEAL VSYDSALKIN 360
  361 PDNIAKIYTS NPAIASLNTS QFSECYAAIP SFNSDSAKIW YDKGTLYLGL SDYEEAVLSF 420
  421 EKVLELDSKH AVVWYKKALA LDKLGNYNEA IICYTEALRR DPSCPNVWYL KGYDLDTTGR 480
  481 YKEAVSCYRK TVELDPQFTL AWYALGLDLA HMDEHSEAIA AYDQVIEQNS DFSDAYYRKG 540
  541 RTLDKLGLYQ DAIESYRVAI SLDSSNSAAS FQMEADISRV ERLNHSSAIP SQNIGPIFDI 600
  601 FEIIKGMTGI SDYNAAIMEQ NNVDLIGVVP DGYDAWVAKG GSLFVKGSYE NALLSYNKAI 660
  661 MIKPNSSVTW YMRGQTYEML GDRSSAINNY EKAVDLDSSY KDAWFALAQN VYKSSNYYYA 720
  721 IQAYDGLLNL DPENKTALLQ KGQAYDKIGI YRSSLASYNK LLKVDTDNTE AWYLRGLASY 780
  781 NLGNLEDAVY SYDKVLSSDP QNIDVLLAQS LVLEDLGLFE DSINNYDKVL EMKVDDPSVL 840
  841 MKKGNVYEKL GLYKDANDCY DIVLINEPAN SLALSRKGFN LYMLGDYIGA MDQYDLVIAK 900
  901 NPYDAAAWYN KGNVAYLTSS YAGSTQFYLK AVELQPKSIT AWYNLGYIAN IRGDVDTAIT 960
  961 YYEKALAIDP NAASALYNKR FAHYRVGQSV SAETERKKLD VIDPEFIVAL DDRGTKFFTP1020
 1021 DEYDPAIVYE LPSRWYDGED MPGTTSVKE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle