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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88186238, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSASTRVARR ALVVNPFLST GRTLPRSALL ASSIHLARNA HNLGPASALL IPVRTLTTSG  60
   61 TTTHGPPGGP PPGFNSEEAK KPLPREPAST KPAVKAAEKP KAEAGVKEAV KEANGAQAGS 120
  121 DASLTQLTAQ KEAAVEEKGE GKKEEKKLTI GQKIKKEAQH YWDGTKLLAA EVKISSRLAL 180
  181 KMAAGYELTR RENRQLQRTV QDLGRLVPFS VFVIVPFAEL LLPVALKLFP NMLPSTYEGQ 240
  241 KSRDKKASTL RATRQEVSDF LRQTLKETGL PLTQATAQKE EFTNFFRKLR ATGETPTAED 300
  301 VIKVCKVFKD DLTLDNLSRP QLVSMCRYLN LNTFGTDMML RYQIRHRMRQ IKRDDRAISY 360
  361 EGVDSLSVAE LQVACASRGI KSYGVSPSSL REDLQTWLDL RLREGVPSTL LVLSSAYMYG 420
  421 QTSSQEGVSS QIQALTGVLS SIPEELFHEI ELEVHNAEGA ATNKQRLEVI KEQQELIDEE 480
  481 LEQDQENQAT GFATPRDTED IDEKEERQAH ATADATIEKA QVGEAVDAEK DMLAAARLEQ 540
  541 EQEKREAAPP KSSEK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle