YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|116182520, gi...
Protein type:	Transmembrane
Type Confidence:	0.50
Topology Confidence:	0.44
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSWSMVQHS SPLPISSRRP SPKLTLVTST LFRRNWTMLG AVFVGAFAFE IGYDNVMNKV  60
   61 WDNNNRGRQW KDIRHKYIEG GDEE

Type	Start	End	Confidence
Cytoplasmic	1	31	0.45
Transmembrane Helix	32	49	0.44
Non-Cytoplasmic	50	84	0.91