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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|116182456, gi...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTHAANEL KQQGAIEASR DPESNVTAAD AERKIVEDSR EAGVTAFTFD PDASPEEKRA  60
   61 QARAAVPEGF HRRPKGVAIV TDIDDGTKAD IDLPSPSKAG AIEVAKGEDG KPLANGAAGE 120
  121 EEEDWSKTGW APRFGWPTEP TDQGEDMLDH STWVESQLSE QFFGDWYHNA AVIAFACLAS 180
  181 WLVAVLGGGL AWVFIVMAIC STYYRTSIRR VRRNFRDDVT REMALKKLDT DNESVEWINS 240
  241 FLVKFWPIYQ PVLAQTVINS VDQVLSGATP AFLDSLKLKS FTLGSKPPRM EHVKTYPKAD 300
  301 DDIVVMDWMF SFTPNDTADM TSRQLSNKIN PKVILEIRVG KAMVSKGLDV IVEDMAFSGL 360
  361 MRLKIKLQFP FPHIEKVEMS FLERPTIDYV CKPLGGETFG FDINFIPGLE SFIMEQIHGT 420
  421 LAPMMYAPNV FPIEVAKMLA GTPVDQAIGV IAITLHGAQG LKNTDKFAGT PDPYAVVSLN 480
  481 NRQPLAQTKV VKENANPRWN ETHYVIITSF NDSLDLDIFD YNDIRKDKKL CSASFPLENV 540
  541 EEVYEHENER LELKHDGKAR GVALCDIRFF PVLESKKLDD GSMEPAPESN QGILRFTVEQ 600
  601 AKELDGSKSM VGLLSPYAML LLNGKEVHSS KKLKRTNNPI WDNGSKEILI TDKKNAKLGV 660
  661 AIKDDRDLAG DQLIGTYQIK LEDMLDFMEK GQEWYNLAGA KTGRVKMMAQ WRPVAISGIA 720
  721 TGTGGYKTPV GVLRVHFKYA RGLRNVEALG KSDPYVRVVS AGIERGRTVT FKNNLNPDWD 780
  781 EVLYIPLQTA RGRMQLEVMD AESVGKDRSL GLTEIDKADY MVQDENGEWL VHDEKVEHND 840
  841 GLRMHNKGTP KGVLTYTVAF YPTLNIADPE EEEEKEKEIA AKEKEMAERE KEEAEKDKSS 900
  901 LARPSMDARS SVRQSLDVRS NDGNGNGNGK EPGTPLTPTS PASAISPRKS RDVREPPKVY 960
  961 LTPQELLAHE SGVVIFRLME ADLPKTQTRI EVFVDDMAFP SYVSSTARSR QNKFDEMGDC1020
 1021 FIRELEFSKL TIVVSERTDK HDDAHKQQHT LARLSGNTLD TLKQCLNNPT VLKMKGEDGE1080
 1081 VYSIRVSLKY VPVKMQLDPS ESINNMGNLR VDVLDAQDLP AADSNGKSDP YTKFELNGQE1140
 1141 VFKTKTQKKT LNPAWNEFFN VPIPSRTGAK FKAAVWDWDF ADKPDFLGGT DIDLGMLEPF1200
 1201 RAQEFKYILD GKSGVLRLRM LFTPDYVTRT RQGTSTLAGT FSVPGRIVTG VAGVPLKGGA1260
 1261 AVAGAVGHGV GKGASFLFRG LRGKKDDGDS SDEERNSADV PLITTEGPSE SKAIANGTPL1320
 1321 HHTRTKSVGA SSVHSAIIPG AASGTASFTI VSASGFPPSA DIYITVTQLR EDGKGKQVGK1380
 1381 TKHRKSPSGT ARFDETFRIQ CTPDAQFKIE AKEHHTFGSD DHLGEMLYFV DESGSNAEKT1440
 1441 LPVGSGTVVL KSNFVPNPDS SSAIDDSASG GRLVPDSPKS GKSVVGGVRR SFLGKRELKV1500
 1501 PGRDGTPS

YRC Informatics Platform - Version 3.0
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