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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|116182430, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGLGAVASA IAVVELTAKV GSLCLEYSSA VKSARSDIKR LRKHTDTLKT TAEGVRELLQ  60
   61 GPYGARLETS QKLREALSNT CSQLGDVATK LEEKLHKGHR AKTMRRVGLR AFGWPFESKD 120
  121 VDKIIANLQR DQDSFSAALQ IDQITEILDI HSKIDLAALP VASGAASDSH AEEHNARCHP 180
  181 DTRTKLLRQI REWASDPQAE NIFWLNGMAG TGKSTISRTV ATSFAKDGLL GASFFFKRGE 240
  241 GDRGNAGLVF PTIARQLVHK IPALVPSIRE AIDADPDIPK RALRDQFEKL ILHPLGCIQR 300
  301 TTAIVVIIDA LDECDGDKDV KTIISLFAQA SVIRSVRLRI FITSRPELPI RLGFKDVQGK 360
  361 YQGLALHQIP EQVVEQDIST FLAYELTRIK DEYNGQVPLG WPGENDIRTL AQMAVPLFIF 420
  421 AATVCRFVDD QGRSNPAKRL KKVLEYRTAA RNSTLDKLDA TYLPVLDQLT SGRTDQDKAE 480
  481 VLAEFRSIVG PIILLAQPLS VRSLGQLLDV ECESVHALLN SLHSVLDIPS VDDAPVRLFH 540
  541 LSFRDFLVDP AKRTKNEFWI DEAEYHKTLT ERCIQLMDQC LGQDICCLKV PGMLRSELDQ 600
  601 QTINAHLPPE VQYACQYWVH HLKESKHNIE DDGPAHAFLT NHLLHWLEVL SLLGRLSDGV 660
  661 LLIRTLLHAA QLQPDTAPNF VDFLNDAEKF IRSHGAIMER APLQIYGSAL VFSPTLSRVR 720
  721 KQQWKKRLSF IKSVAGINDH WGTLQQTLEG HSRSVTAVAF SADGKTLASG SYDKTIRLWD 780
  781 AVTGTLQQTL EGHSHWVTAV AFSADGKTLA SGSGDKTIRL WDAVTGTLQQ TLEGHSGSVT 840
  841 AVAFSADGKT LASGSYDKTI RLWDAVTGTL QQTLEGHSDL VTAVAFSADG KTLASGSDDK 900
  901 TIRLWDAVTG TLQQTLEGHS GSVTAVAFSA DGKTLASGSY DKTIRLWDAL TGTLQQTLEG 960
  961 HSHWVTAVAF SADGKTLASG SDDKTIRLWD AVTGTLQQTL EGHSHWVTAV AFSADGKTLA1020
 1021 SGSGDMTIRL WDAVTGTLQQ TLEGHSGSVT AVALSLDWNS GLDASKNRGL GGDILFFNGE1080
 1081 WITRGGKNLL WLPPNYRATC TSVYNHTLVL GHASGQVTFF QIVSA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle