YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|116182136, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLYYTLVFL LLVGEMGLFM LLIMPLPFAM RRKVFTFISE NPIVAKVQYW MKITFVFILI  60
   61 LFIDSVNRVY RVQVELAAAT ENTGASAPAI MGHERLEVQA RKFYSQRNMY LCGFTLFLSL 120
  121 ILNRTYTMIL DVLRLEEKLK QYEGTEKNTK QAEKLAMAGD PGEISRLKRE VELRDQDIAT 180
  181 LKKQAAGLHR EYDALAEKYG RTQEDGSSKK DK

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.67
Transmembrane Helix	7	29	0.93
Cytoplasmic	30	48	0.69
Transmembrane Helix	49	66	0.77
Non-Cytoplasmic	67	212	0.53