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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88185681, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPSVIVVGG GLSGLSAAHT IYLAGGNVVV LDKQGFFGGN STKATSGING ALTRTQVEHG  60
   61 IQDSVKQFYD DTLKSARDKA RPDLIKVLTY KSAAAVEWLQ DVFNLDLTLV SRLGGHSQPR 120
  121 THRGHDAKFP GMAITYALMQ RLEELAETEP HRVRIIKKAR VTGLNKQGNS ITGVQYEHNG 180
  181 ENLSIDGPVV LATGGYAADF SDSSLLKQHR PDTFGLATTN GAHATGDGQK MVMAIGGNGI 240
  241 DMDKVQVHPT GLVDPKDPGS KWKFLAAEAL RGEGGILLNA DGDRFCDELG HRDYVSGMMW 300
  301 KEKDKGKFPI RLILNSKASN TLDFHTRHYS GRGLMKKMTG KELAKEIGCT PDHLQKTFQT 360
  361 YNAIAEGKQK DPWGKKFFHN LPLDISDDFH VSLMEPVLHF TMGGIEINDK AQVLNKEQKP 420
  421 FEGLYACGEL AGGVHGANRL GGSSLLGCVV YGRVAGDSAS NFLFQQALKG STGAARLGQI 480
  481 ALHIDPSTPG KISVEWAGAS STEAPKAQAV LASVPAAKQE SSEAKPFAIP EKEYTMEEIA 540
  541 KHNKKEDLWV VVKGVVLDLT NWLDDHPGGP QALLNFMGRD ATEEFEMLHD DEVIPKYAPS 600
  601 QVIGRVKGQK VTLEI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle