YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|116180904, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFGEQLRSS VIREYQWYYI DYDGLKADLK QPSGPIQPVA DDGAKSGKSQ RREWTEEDES  60
   61 RFVSKLESEL DKVHSKQQVK AMEISRRITV SEREVRDVVN RLNERGLGQD GPSEEEFMLL 120
  121 EEDLSDIIAD VHDLAKFVQL NYTGFYKIIK KHDKMTGWHL RPVFDTRLKA KPFYKENYDA 180
  181 SVVKLSKLYD LVRTRGNPVK GDSAAGGSQA SFVRHTTKYW VHPDNVTELK LIILKHLPVL 240
  241 VFNASKEFEA QDSAITSIYY DNPDTWELYE GRLKKTEGAE AIRLRWYGGM QNETIFVERK 300
  301 THREDWTGEK SVKARFSVKE KNVNAYLRGE LLPAAIFEKA RKEGKKSEKA IAEDERLARE 360
  361 IQWSVLKKGY KPVCRSFYHR TAFQLPADAR VRISLDTELT MVREDNLDGV TRSGNNWRRT 420
  421 DIGIDYPFSQ LPPGDVVRFP YAILEVKLQT QLGQEPPEWV RQLISSHLVE AVPKFSKFIH 480
  481 GVACLFPERI DLLPFWMPQM DVDIRKPVTH DFGIKRLEHS ATTSISDDEE EEDDDYDSDD 540
  541 EQRPVTSGAQ AGESSAAAAR NGRAPVLSAD VEDQTVDRPT GEDTYLYDSD DEDDEDRLEE 600
  601 ARRVGGWTYV QTRISTSANA AARGTWWLLK SLVPRPRATE VPRNARLESL LGTGEIQQRR 660
  661 FKAPKGKKIY VPVRVEPKVY FAAERTFLGW LEYSIYIGTI AVTLLNFSTE HGNRASFVAA 720
  721 SAFTLLALLS LCYSVVIYLY RSSAIRTRRV AQYYDKVGPS ILCAALFAAV ALNFAFEGKS 780
  781 REFW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle