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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|116180574, gi...
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSFWSLTAF LLVDEGEELQ AWGTPSVSDN HDESPPSSPS FAPVGRPMVK KRFRTNLPDP  60
   61 LPLNIPPMNR LSSLRHSYSK AVVSRIDRAG NLKFIEQFRY TIVASQLLSG HSIAMHHAHH 120
  121 SRSKDMPEAT QTVVVTSTGL FATAAAALVV AWVARWVYSG GYAHLTKKRV SFTALVLVAV 180
  181 AVVSQAYLRQ QWLRYLRNQA LGEVTTFVAR SQDFDSASSA AISLIQEVEL VSRGYRLSAP 240
  241 LPPISRMEDR SQIRRCSRLR KALKGRFTDM IESHMQACTA VKEFAEQGDL EKYHDIYDIS 300
  301 DFDISDAMRG FSEKEFDDPE SLQSLKIAAA RFYTIRKILL CSLLAFEAAG DNTDFLRWST 360
  361 AVEGLKTLNQ ATSQGFERVR QILSEEETFP IISDSKSPLS PNREKRRSQF MKLNSLSMGI 420
  421 RGLQAKLALL REESERTLNE AEDVSELGNN LMAQYESIGQ DLKMLTQAWE EGKAALASGI 480
  481 DRNEKRLSSL STLLSPATSL SGLTTVEEGG TLEAFKALTG ESPPGSTFGS PNGDSDVVEV 540
  541 FEAVALPTRT RSLLSRDERI AKMKEEREKR EAARERADAT RGMLRELETV INLRPKRATM 600
  601 PAPSRISL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle