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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88184826, gi|...
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSWAAGPGTL PLFVQGRPPG ITFGGSWQQA PVATLEGSGA VRSPSPQLLR IRRGSLNNKA  60
   61 SNFELSCATE DEIDIFAEMS SSSPTPGQSP PQRPSKRSEI PQKLRNGSVI IPSTGERSHR 120
  121 SFTLRPSSLF SSRQADASES PETEPGFSRQ SISNRAHATA HSVREGGAPF LRWLNSPVGH 180
  181 GIIKCTLAYT LGSLATFWPP LSNFLGRPDG KHVVATLTVY FHPARSMGSM IEAVLIAIVA 240
  241 VAYAELVSIL SMCTSILFGS VLGMVTLAHG LVLAVFIGGG FGFIGWVKQR MNNPLVNVGS 300
  301 TLASLAIIGV VTKETAVLTS VFSNQKIVQI LKMLLMGITI TTIVNVTVWR ASAVSALRQS 360
  361 MTKGSISLGG MLSLITRGFL SGSEDDVLSP EFAAASSAYS SVYPQMTKNL REAKFERYFL 420
  421 GRERVYQLDR AVVRSMETLA QSIGGLRSAA NSQFALLKEP MAPLSRVGSP VGRVTSPLFS 480
  481 PNLHRTIVST MRNGREGLPL LSAIDEASDE SREEEGGYFA PRRQSDATAA SLPPFRHASE 540
  541 IFALFIELLG PSMKSLAYTL SEVLQDPPFG AAPDYKITIN DHFRNSLADA LSLFNEARAH 600
  601 ALQELYKTLE LDRTRSEAIQ ADFEEVAAAC GHFSFSLQTF GEEMQKYLDV LDDLKLADEH 660
  661 NKRSWHWLKW WRNGRQPGQK ALALPYDNEE QEPLIKPIKK TAMPRGVEPL LRRRDTFSWE 720
  721 AAPETKKSKV VATLSQRVLK AARRLARDDL RFGLKVGVGA ALWASLAFIP QTRETYRHWR 780
  781 GEWGLLSFMI VCSMTVGAAN TTGWARFLGT LIGIATAGLN WEVSQQSPFA LIPLGSLVAF 840
  841 WSFYVIIARG NAPNGENHAT GLQRVDAVRL QSLSKVDDDD DDEGGVDPII KEILLHRFTA 900
  901 VTVGIIWGLI VCRLIWPISA RKKFKEGLSM LYLQMGLIWK RGPLAILLRS DCTRSYLRTG 960
  961 EQAALQKYAA RLDSLRSSAA REFELRGPFP SEQSRLLMGC AQRLLDAFYA MSLVTQRKGN1020
 1021 LTEGERALLL YTADERAMLC DRICHVFQVL ASSLMLEYPL TDAIPSVTRM RDRLLGKIFQ1080
 1081 FRKDHQQDAD EGGSNNDATT NYVGLGRLGH LNVQEHDYAL LYAYALVTGQ VAEELKVVAK1140
 1141 EIEGLFGVLD DETLLLQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle