YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|116179764, gi...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADKSGRRRR SSSILQVYHE PPEPIEQLSD QSALPNLNAN WVNAKGAWTI HPVLIACLKI  60
   61 FYDIIPGVSQ ETSWTLTNIT YMFGSYLMFH YVRGVPFEFN GGAYDNLNMW EQIDDGAQYT 120
  121 PAKKFLLSVP IVLFLLSTHY THYDLTYFTI NFLAVLAVII PKLPFSHRMR VGLFSGVPED 180
  181

Type	Start	End	Confidence
Cytoplasmic	1	73	0.67
Transmembrane Helix	74	92	0.55
Non-Cytoplasmic	93	144	0.58
Transmembrane Helix	145	165	0.86
Cytoplasmic	166	180	0.87