YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|116207650, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSDRMTRSA SAALLTPPSE QDEPNIVVGT PSVRPTTVVT TARPRAATTT PRKGKKAAVS  60
   61 KMIVERKIKV VTEQHNINKP AVNEGFPMKE WTVEVYILDQ DGKEKPARCF TKAVYHLHPS 120
  121 FANPVQTFME PPFKCTNEGW GEFEMSIDLF TTEKGGKQTV IHDLNFAAAQ YDNVHVVTFR 180
  181 NPSQALQQIL RETGPLPSDE ERKIKKADGG KKKKTFDVEK MADGLIKLGE DDLLQVIQLI 240
  241 HDHKDDSTYV QNNIDAGEFS VDLYTLPDPL LKMLWDLLVK QGVVVV

Type	Start	End	Confidence
Signal Peptide	1	21	0.86
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	286	0.99