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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88183705, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.19
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAWDHLSITK PHLVYIILGG FTSLFMLCST VIKERMYIGE ATVATLCGVI FGPYAANLID  60
   61 PETWGSVDII TIEFSRLVLV VQCFAVGVEL PKYYMEKHWK SVAFLLVPVM TFGWLITSLF 120
  121 IWWLIEPLNW LESLVVAACV TATDPVLASS VVGKGKFAKR VPKHLRDLLS AESGCNDGMA 180
  181 FPFIYLALYL IHDKQSARDV SFHWIVYTIL YECVFGAVYG FIIGYLARHG IKYAEKRDLI 240
  241 DRESFLVFYF VLALFCAGSG SILGVDDLLV GFAAGVGFSN DGWFTQKTEE SHVSNVIDLL 300
  301 INLAYFVYFG TIIPWKAFND AVLGLQAWRL AVLAIFVILF RRIPIMMVLK PVIPDIKTWR 360
  361 EALFAGHFGP MGVGAIFVAM LARAELESEN PVPLSELPEP GTEHYTLISL VWPITAFIVV 420
  421 ASIIVHGSSI AVFTLGKHIN TLTITMSYTQ ANEDGQHWMN RLPRISSQSR SQARTMSDTD 480
  481 GDELKLPEFP PGTLPPVGFP GNFLRRVKED DNSRHGSRSS SLAARRRKSK WDDGIGPGGP 540
  541 ITQSAIFPQR RSQSGPLSPG LQRGSTDQSR PDDISPAPND AGSPSPMEEK SGDRSSAEAY 600
  601 ASPTEDRRQP VEVYDEGENI IIENRDGDVL SVQPVEGGEK VADRAKELAS ELKSEAGPTG 660
  661 WTYETLKKRI MNWRESEVAK RKGKQKTVKG EPARAFQFGN TIIVENEDGE VLKKYDLPAQ 720
  721 KPQPDLVSQG LKYMGMGVFA KAMEKPGAEA STQATGGPSA AGEPSTTHRP RKKSVVAAEE 780
  781 EDEDDRHIRF TIGGVGRRMT KEDFIHEIQG LDKSTRREVV DKSSASQGLK ALAKLDSPQI 840
  841 TVSSAQSSTS KKDHATAAAA AATAKPATQR PAPAPSNRPP SSSSSPDNRA SSSDAPSSEV 900
  901 PETEVERGRR RAALKGSGDD NDNDGEEQGE TAAERRRREA ALGMAPHADD GEDSDDDDTP 960
  961 RVPPSRSIRF ADAVERGRQA 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle