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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88183687, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFTQPTVSRR PTSTGPGNLV VSPVTAAPAS STPPTRGSRL RGLTYLRNYT QTHILSREHS  60
   61 AHNNTHAPAV SNPQPATSAP SPPTISTNPW FTSGFTSARH DHSTTTPALD NNDSSNINND 120
  121 NNNNYNPTSS STRTNRFSHL VPTLGQPLRR SPDSSNERGP SGPATGISSE LRAADAPPIP 180
  181 FPSSKNGSRI ADGNRQTTGE MTRARSATTG DALTRHDGGG GLDTLPSIRF STFVDPRATR 240
  241 PSLKFGPISR TLPSGREVIR VGRYSERDSQ PNIPVNAPSA APVGFKSKVV SRRHCEFWYE 300
  301 EGKWYIKDVK SSSGTFLNHI RLSPPGTESK PYPVNDGDIV QLGIDFKGGE EMIFRCVKMR 360
  361 LELNRGWQNK LNTFNIAPCQ CLFVAPCSHT WHYKCIRSLL SSPSFPIFIC PNCRAAADLE 420
  421 AEVEDPEEWE QLSDEGAVAP QGALLQPPLV DPNSQNSNSP SAPRKSRESV RSTRLFAAQQ 480
  481 QQQLQPAEDS NMDLLMSSSP PRQESPPQLD GAVTLADPNL LSHTLSTPMP IPSPAQRTLP 540
  541 NGRRETRTPS PTGAPVANGH EGPITPRNDA GPWVFDGSGV RLSSESARPA GAALSQGGEV 600
  601 PASSIEAAVQ AAGARLVREN DDP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle