YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|116207072, gi...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFDIDWRGLL LPLAYLGVLV GTFMTFSRVY RKRKAFESAN LAPWFGPHLQ RNIYLSLLHM  60
   61 EPEEGSEKTP KVPDSVIRAA LLRRAVEDIH RIIQIRTAKQ ACSSLLQRGS VGDDLWQRFQ 120
  121 RAEKEMEEEL RDVVMEANAL VPNWGQIIFQ SANEIAANKA LRDRIDEIEA QTEKDKEWWE 180
  181 KRRSNIKTEF MKELEAEAGA EEGQDHEGSE KGQANSKSSV AGSEDEPVLV ETDTPSAASP 240
  241 SGASKKKKQG GKK

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.76
Transmembrane Helix	8	30	0.82
Cytoplasmic	31	253	0.78