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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|116207056, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGFWNQHET DEDRAGRSSP PGRSSEDTRP DTRVDEHTRL LPNRIHSTPY LSPDDPAVSP  60
   61 YNLWTVRFVR WITVALTVIT FVWWVLMVVS VFITPPGLHV RGSPFFAFDY ASLALLTLIV 120
  121 TLLFFSVPSR LARIFGIVNA VVLLVDAVMI LAVPGLRHAE IWVGIASVIW AALMAAWFVA 180
  181 ADRTVQWAKA EEEERLTGRP ESRRTVLEWA EVTLSTVVLV AMICIVGLMT LTLTLRAIDV 240
  241 GLPPPGERYW VDGDRYQIHL FCYGNKTDAA GARSTTVLFE GGEDPVERGL WQFAENAVKN 300
  301 GSITRFCFAD RPGMAWSDTA PSPFSASIAS DGLSETLTRA GEEGPWILAS AGIGSLYSRV 360
  361 FSSRHGDQVR GILMIDPLHE DLLARTGSPG RGFLLWIRGV ISPCGIDRIL GAIFRGRRAV 420
  421 DRVWGRSSYQ SGTTIFAKLQ ESLVAESLTK RDVVSSRAIQ DKDTPLVVIS SGHQIRKDRD 480
  481 WENKQRDLSH LTTNLENWDI VDDAPHRVWD TLGGREIIER RLRKLVN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle