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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88183248, gi|...
Protein type: Transmembrane
Type Confidence: 0.82
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAVFGRSRR RMADATAHAN SGHPGAPMGM APVAHVLFNR FLRFNPKNPQ WLNRDRFVLS  60
   61 NGHGCMLQYA LLHLYGYAVS LDDLKAFRTV DSITPGHPEA HDTPGVEVTT GPLGQGISNA 120
  121 VGLAMAQAHT AAVFNKPGFD LVDNYTYAFL GDGCLMEGVS SEACSLAGHL QLGNLIAVWD 180
  181 DNKITIDGDT NQAFTEDVMK RYESYGWHVL TVENGDSDLA GIEAAIKKAQ EVKDKPTLIQ 240
  241 LKTIIGFGSK QQGTHGVHGS PLKADDIKQL KEKFGFNPEQ SFVVPQEVYD LCNKAASSGA 300
  301 AHEEEWNKLF AKYAEQYKAE HADLARRLKG DLPEGWEKHL PTYTPADPAV ASRKLSETVI 360
  361 NKIFDAIPEL VGGSADLTGS NLTRWKGAID YQPPSTGLGT YAGRYIRFGV REHGMGAIMN 420
  421 GMAAYGTVIP YGGTFLNFVS YAAGAVRLSS LSRVRVLWIA THDSIGLGED GPTHQPIETL 480
  481 AHFRALPNCM VWRPADGNET SAAYYVSLVS KHTPSIMALS RQNLPQLEGS VIDKAIKGGY 540
  541 VLHEQEGADI TLVSTGSEVC ICVDAVKELA EKHNIKARVV SMPCFEVFDT QSKEYRLSVL 600
  601 PDGIPSLSVE VMSTMGWERY THEQFGLNRF GASGPYKDVY KASYTDPSVF TPEGIAKRAV 660
  661 ATVNFWKDVP NIRSPINRAF QQIL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle