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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|116193995, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSNIFFTGR DNPERVPASD KLKKGELALV WFRARATPGG WSSRTRCPCP PPVARFPSPC  60
   61 PIEVDESLAL WHRAHPLSRR ILLLRTFFEK TQRDDWKITQ SLRRVSPQKQ PESCRLPLVQ 120
  121 STRPLKGPKP RNLEGRRCPT IVHCSYRHTT DWRLASLQDE ATMSPPTTPT LSHGNSNGTG 180
  181 NGTAKPSGRA PRRSGKPQHM NGPLYKQANS NVVLVRRVKR KNEGPMKQLT RWFVNNQIGF 240
  241 SFNLLALLFL AHGMPRARDY TAKYFNLSYY NPSTGNYGLG WADGHVVLFS IVLLTGLRAA 300
  301 TMEYILAPFA KSQGISKRKD ITRFSEQAWM SVYYSFFWPL GLGPAQYIYY QSPAYFNLRE 360
  361 LWTGWPDREL TGLMKGYMLA QLGFWLQQMV VINIEERRKD HWQMFTHHIV TSVLIYTSYR 420
  421 YGHTRVGNLI LVLMDVSDLA LGLAKCLKYL GYHTICDVMF GVFMASWLAA RHFLYLAVCY 480
  481 SVWAHTPDIM PTGCFKGSRD NLVGPFDPPT EQGFSYLLEP LWDSEGTFCY NETVKWSFLS 540
  541 MLLFLQCLTI MWFFLIVRVA IKVIKGAPAE DVRSDDEGAE VEDEDEFVYE EAKPLEEEVG 600
  601 VDEIDLKSWE RRSGVKRQGP STSGVSLPGH SDRKELLGRI GCDKQVE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle