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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88182320, gi|...
Protein type: Transmembrane
Type Confidence: 0.85
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVPFLGRLN ITEYVALVGS FLLVGLEAFI RIFTLALPSS LLELCYGVSR RLFNRLASPA  60
   61 QKRAERRRKS ISTSIRNASD FVDLCAAFGY TAEEHVVQTK DGYLLGLHRL AWKKGEEEVR 120
  121 VNRGPNSVKK RVVYLHHGLL MNSEVWVCLT DEQRALPFTL VEKGFDVWFG NNRGNKYSKK 180
  181 SIHSSPTSLK FWNFSIDEFA FHDIPDSISY ILETTGQQSL SYIGFSQGTA QAFASLAVHP 240
  241 KLNDQVNVFI ALAPAMSPAG LSNGIVDALV KASPQVLYLL FGRRSILSSA TMWESILYPP 300
  301 LFTKVIDMGL SFLFAWRTQN ISTSQKLAAY PHLYSFTSTK SVVHWFQIIR TKSFQMYDDD 360
  361 VHPPLGLSPS ASRYTKVAKY PTRNIKTPIV LVYGGSDSLV DIRAMLRELP AQTLANEIPH 420
  421 YEHLDFLWAR DVHELVFPHV FDALESFTGA EHTREEYARY QIKRQSSSLL GVPPTAVAGG 480
  481 KKKKAMTHLA RGSDVVDSDV STAVGGGSNH GDDEEEDESS EVGGAGQEEE KGEDTEARRR 540
  541 RQLRIHTQPP PPQPQPQDQP HATAATAPPT PESPVAPPAP RVPKLGDAEV VDTGAHVVAA 600
  601 MAAAPPRSNS PRPPREKKNV VGGGQEEPAP KVGKADSTLQ AGKEDGPVTA RKGKAKAKGL 660
  661 VTTGLGSEVG GSKSGSGKAE VGTEGAGTPG PRSEVGGSKS GSGKAEAGTG SGSGKKVQTE 720
  721 GRKRRGSVKK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle