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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|116193301, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVVIPSVDR LLLSFLTTSG FKTTATSRDP EPHVGPMDGK RSLPLGKGTE GKKRKDPQAV  60
   61 TKDTKSRPHG GRPTTTATTT TTTGRSAKRV KFQDARNIRT QPSDAALEDG KLDLQKFLNA 120
  121 REFEIKALEN SMRKCKAVNA TRVFQQVPRA MRRRTASHNA KRVPKRLRER AKREMWEDNT 180
  181 PTVEARKRRP RTTRARIRAE TAKKLGILAA RKRKRLLEKA VAEGTKTAGG SKPTVHTRLA 240
  241 RPKIRRDMLN EPPKVESKFR KRQMNKTWLP THLWHAKRAT MTEPSKPLWR FAVPLTPTEK 300
  301 CYRPTHRASG QRGVVVWDMS YMSTIGLYGT AEGAERVLKG LGLTQESAWG ARGQKWRAGV 360
  361 RKWTGILSKQ VKDSRRDIGP ATIVWNPQAP AQTDDAMDLS RPKKPQRQLL IRTHPSCFLE 420
  421 LFQELLTLAK MQKPRLHLED LRFEIGSIEL TGPASTEALL GILQPYCGEP GNQERHGQVF 480
  481 QSLAGVANPA SLPRDALLAF SVQDPRLAYP PKRANIPLGG GADGPLVEML TKWPVEEGLK 540
  541 PSDIFSRDCR FKASQLPSQK SINRRRGANA PGETLPVTAA DPPIPVMLLA SRPSTDGQAQ 600
  601 GTWTLLAPWK CIMAFWYTLM RCPLSSGGNP RLGGLNEQRQ IAFEHGAPWF PGDFPATDAG 660
  661 RDWELEQRVK RKQDWDRRPK GKRVEWRSLD LGAGRKGETG DGLACDFEHL FALSQTTSSS 720
  721 IPDGTEMDID PPERSGESAP AKVPEPSGVA LGLIRCLSKT AFTSLLGLLN PAKPPTNSIV 780
  781 TIHLTFIARG VANNCARIYR LPSRKPRIAD PSDDAEVLAS DPTSTHSSGS LPRDLRDQWL 840
  841 RGLPNSSRNR GHDRRSRLGV PPQMPPGIDM ETRKKLLAQS LIATELPYPK PAANELDVGG 900
  901 HHPLCPDTED LLGFVTTGAF SLSEGRGTAI GSISAEKALE SVLGAGAKEG KLCIVRNAGE 960
  961 NVGWLARWEL V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle