YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88181854, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASFVEGLWQ SIFTPGPTPT LLVATNVTFA ALQVVLASLL YATHSIHFLI LSVLCGGLWA  60
   61 AINWFARELK AHQQEEEEKK RRTLAARPPP PRAPSSDDSE TEVEAATSTA SLRKVPTIAP 120
  121 VAAKAAAVST EVEPAEARGE LKLRVAEELP SPSQGQRSGV STEDEWEKVS ENEKDK

Type	Start	End	Confidence
Cytoplasmic	1	17	0.66
Transmembrane Helix	18	37	0.86
Non-Cytoplasmic	38	44	0.52
Transmembrane Helix	45	66	0.89
Cytoplasmic	67	176	0.81