YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88181693, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFDQEAGAT KACFGEAPPA GHRGATGSQL SRDLDELHSG HVICNPPPTI ARPRQNRARN  60
   61 NTSEPSIHPF QPSFNNGEPT SPNNSTAKHE IEPAQLTNPP KPQLDKLVGL AMLVASSVVF 120
  121 LYYTIWTLLM PFVDSDHPLQ NFFPPRVWAI RIPVILVLLG CAVVGSFLSV VMIRSNRKKA 180
  181 AKAKAAAAAA GASGAAGKKK A

Type	Start	End	Confidence
Cytoplasmic	1	106	0.99
Transmembrane Helix	107	129	0.89
Non-Cytoplasmic	130	148	0.93
Transmembrane Helix	149	172	0.93
Cytoplasmic	173	201	0.96