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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|116191741, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGLGAAASA IAVVELTAKV GSLCLEYSSA VKSARSDIKR LRKHTDTLKT TAEGVQELLQ  60
   61 GPYGARLETS QKLREALSNT CSQLGDVATK LEEKLHKGHR AKMMRRVGLR AFGWPFESKD 120
  121 VDKIIANLQR DQDSFSAALQ IDQTAEILDI HFKIDLTALP VASGAASDSH AEEHNARCHP 180
  181 DTRTKLLRQI REWANAPQAE NIFWLNGMAG TGKSTISRTV ATSFAKDGLL GASFFFKRGE 240
  241 GDRGNAGLVF PTIARQLVQK IPALVPSVRE AIDADPDIPK RALRDQFEKL ILHPLGRIQR 300
  301 TTAIVVIIDA LDECDGDKDV KTIISLFAQA SAVRSVRLRI FITSRPELPI RLGFKDVQGK 360
  361 YQGLALHQIP EQVVEQDIST FLASELTRIK GDYNGQVPLG WPGEGDIRTL AQMAVPLFIF 420
  421 AATVCRFVDD QGRSNPAKRL KNVLEYQTAT RNSTLDKLDA TYLPVLDQLT SGRTDQDKAE 480
  481 VLAEFRSIVG PIILLAQPLS VRSLGQLLDV ECENVHALLN SLHSVLDVPS VDDAPVRLFH 540
  541 LSFRDFLVDP AKRTKNEFWI DEAEYHKTLT ERCIQLMDQC LGQDICCLKV PGMLRSELDQ 600
  601 QTINAHLPPE VQYACQYWVH HLKESKHNIE DDGPVHTFLT NHLLHWLEVL SLLGRLSDGV 660
  661 LLIRTLLHAA QLQPDTAPNF IGFLDDAEKF IRSHGAIMER APLQIYGSAL VFSPTLSGVR 720
  721 KQQWKKRLSF IKSVAGINDH WGTLQQTLEG HSDSVMAVAF SPDGKTLASG SHDKTIRLWD 780
  781 AVTGTLQQTL EGHSNWVTAV AFSPDGKTLA SGSRDKTIRL WDAVTGTLQQ TLEGHSDSVL 840
  841 EVAFSPDGKT LASGSHDETI RLWDAVTGTL QQTLEGHSNS VTAVAFSPDG KTLASGSHDK 900
  901 TIRLWDAVTG TLQQTLEGHS NSVRAVAFSP DGKTLASGSH DKTIRLWDAV TGTLQQTLEG 960
  961 HSDSVLEVAF SLVGNSGLDA SKNQGLGGNI LFIDGEWITT GGKNLLWLPP DYRATCTSVY1020
 1021 DHTLALGHAS GQVTFFQIVS V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle