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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|116196504, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLEEDPSTL IRHTISNFNI APDKTAVSRV SESLSTLQQA RELRVRDAEE SLRQLGRTLG  60
   61 KLSSQHAELT ASHSSTQHAS EIARLDTQKF RVAKAASDLE METERLQAQL ADLNARLQEL 120
  121 ELQGVDGGGV GIGEGSGGAG AGSGGALEDE LLLRLKVYRS LGIEIERDSK DGEFNRVVVR 180
  181 NDRKGDVHVV NIDRKFSRFF YANYFWQTMA NHIENTIMGR IVLAAIKFSV WTFIIVGIFP 240
  241 VVLVTAAISG TSVFLFLPLT LLYIYCKGMC SYIYDNTIGG PNPNSPNCPE FQQAMARYSR 300
  301 FWQDNAPPIT PPNTPPPITP PPTPQETDDE SDSDHYLSVH HPYTLLSRRL HFLNLYPANQ 360
  361 RRGTLAGREH HAQTFQDEHA SDDSPGAIGR RFDDEAVARW LDDYEDDGYF EDDGYFEDDG 420
  421 GYEDDGDYED DGGDERSGLV TRAVVGLMPC RTE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle